Global Post-Translational Modification Discovery

نویسندگان

  • Qiyao Li
  • Michael R Shortreed
  • Craig D Wenger
  • Brian L Frey
  • Leah V Schaffer
  • Mark Scalf
  • Lloyd M Smith
چکیده

A new global post-translational modification (PTM) discovery strategy, G-PTM-D, is described. A proteomics database containing UniProt-curated PTM information is supplemented with potential new modification types and sites discovered from a first-round search of mass spectrometry data with ultrawide precursor mass tolerance. A second-round search employing the supplemented database conducted with standard narrow mass tolerances yields deep coverage and a rich variety of peptide modifications with high confidence in complex unenriched samples. The G-PTM-D strategy represents a major advance to the previously reported G-PTM strategy and provides a powerful new capability to the proteomics research community.

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عنوان ژورنال:

دوره 16  شماره 

صفحات  -

تاریخ انتشار 2017